auto cache file path '/Genomics/GO/data/parsed/gtfcache_P_gene_association.sgd' Getting shared lock on /Genomics/GO/data/parsed/gtfcache_P_gene_association.sgd... Elapsed time: 0 Loading cache /Genomics/GO/data/parsed/gtfcache_P_gene_association.sgd... Cache created with: totalNumGenes => 7166 ontologyFile => /Genomics/GO/./data/unparsed/gene_ontology.obo aspect => P linkRegulates => 1 annotationFile => /Genomics/GO/./data/unparsed/gene_association.sgd Evidence codes used: ISM (951), IEA (44873), IGI (3547), IEP (127), NAS (671), IBA (218), IPI (2636), ND (3841), ISO (10), IC (810), ISS (2100), ISA (228), IMP (11713), IDA (19650), RCA (1), TAS (1017) Analyzing query.txt Elapsed time: 11 Find terms from the P ontology for gene_association.sgd file ... Applying Bonferroni correction factor of 25 Elapsed time 12, finishing up Done