GO Term Finder Ontology Files | Version |
---|---|
go-basic.obo | releases/2024-03-28 |
GO Term Mapper Ontology Files | Version |
goslim_generic.obo | go/2024-03-28/subsets/goslim_generic.owl |
goslim_yeast.obo | go/2024-03-28/subsets/goslim_yeast.owl |
goslim_pombe.obo | |
goslim_plant.obo | |
goslim_chembl.obo | |
goslim_goa.obo | 1.854 |
Organism, Gene Associations, and Authority |
Total Annotated Gene Products |
Total Estimated Gene Products |
Identifiers | Example IDs | Identifier Conversion Tool(s) | Evidence Code Counts |
---|---|---|---|---|---|---|
Skin parasite - Leishmania major L. major GeneDB gene_association.GeneDB_Lmajor README | 4132 | Systematic_ID Systematic_ID | L302.10 L2256.04 LM5.39 sample list | EXP(41) IDA(216) IPI(45) IMP(104) IGI(26) IEP(2) ISS(160) ISO(8696) ISA(182) ISM(184) IGC(1) RCA(46) TAS(8) IC(4) IEA(4) | ||
Trypanosome - Tryanosoma brucei T. brucei GeneDB gene_association.GeneDB_Tbrucei README | 6301 | Systematic Name Gene Name Gene Synonym | Tb927.7.4670 RRP4 TB927.7.4670 sample list | EXP(124) IDA(10762) IPI(539) IMP(1061) IGI(47) IEP(16) ISS(461) ISO(465) ISA(956) ISM(3599) RCA(1132) TAS(582) NAS(4) IC(47) | ||
Default URL template: http://www.genedb.org/genedb/Search?organism=tryp&name= | ||||||
Candida - Candida albicans CGD gene_association.cgd README | 60318 | CGD_ID Standard Name Systematic name | CAL0004982 CaO19.6783 CA5922 Contig4-2621_0008 orf6.8848 sample list | IDA(3429) IPI(72) IMP(6121) IGI(939) IEP(38) ISS(1883) ISO(344) ISA(162) ISM(1328) RCA(6837) TAS(47) NAS(168) IC(23) ND(16098) IEA(312232) | ||
Default URL template: http://www.candidagenome.org/cgi-bin/locus.pl?locus= | ||||||
Slime mold - Dictyostelium discoideum DictyBase gene_association.dictyBase | 9641 | 12098 | DictyBase_ID Gene Name Alias | DdP2X DDB_G0272004 p2xA sample list | IDA(4284) IPI(1210) IMP(3204) IGI(570) IEP(230) ISS(3450) IGC(79) TAS(447) NAS(6) IC(145) ND(6326) IEA(35408) | |
Default URL template: http://dictybase.org/db/cgi-bin/dictyBase/locus.pl?locus= | ||||||
Fruit fly - Drosophila melanogaster FlyBase gene_association.fb README | 14769 | 16085 | FlyBase_ID Gene Symbol Gene Synonym | FBGN0031491 alpha4GT1 4-N-acetylgalactosaminyltransferase-1 CG17223 alpha1 sample list | EXP(1) IDA(19113) IPI(3887) IMP(24639) IGI(4054) IEP(781) ISS(11178) ISO(3) ISA(34) ISM(2950) IGC(29) TAS(2647) NAS(1457) IC(1398) ND(7622) IEA(21119) | |
Default URL template: http://flybase.bio.indiana.edu/.bin/fbidq.html? | ||||||
Chicken - Gallus gallus GOA @EBI gene_association.goa_chicken README | 24742 | 30837 | UniProt_Accession (or Ensembl_ID) UniProt_ID (or Ensembl_ID) International Protein Index | FGB IPI00588322 FIBB_CHICK Q02020 sample list | EXP(14) IDA(1730) IPI(441) IMP(698) IGI(21) IEP(172) ISS(6306) ISO(36) ISA(326) ISM(23) RCA(3) TAS(588) NAS(115) IC(21) ND(51) IEA(55875) | |
Cow - Bos taurus GOA @EBI gene_association.goa_cow README | 19014 | 37225 | UniProt_Accession (or Ensembl_ID) UniProt_ID (or Ensembl_ID) International Protein Index | FGG P12799 IPI00699860 FIBG_BOVIN sample list | EXP(26) IDA(1981) IPI(653) IMP(271) IGI(13) IEP(7) ISS(21755) ISO(9) ISA(149) RCA(2) TAS(672) NAS(65) IC(40) ND(104) IEA(82011) | |
Human - Homo sapiens GOA @EBI gene_association.goa_human README | 19635 | UniProt_Accession (or Ensembl_ID) UniProt_ID (or Ensembl_ID) International Protein Index | TGFR1_HUMAN IPI00005733 P36897 TGFBR1 sample list | EXP(992) IDA(97427) IPI(220449) IMP(25904) IGI(1974) IEP(927) ISS(29793) ISO(319) ISA(1439) ISM(3) RCA(471) TAS(98309) NAS(12683) IC(1487) ND(1695) IEA(71402) | ||
Default URL template: http://www.ensembl.org/Homo_sapiens/geneview?gene= | ||||||
Human - Homo sapiens GOA @EBI + Ensembl gene_association.goa_human_ensembl README | 19817 | UniProt_Accession (or Ensembl_ID) UniProt_ID (or Ensembl_ID) International Protein Index with additional crossreferenced gene symbols | FZD6 B4DRN0_HUMAN ENSG00000164930 B4DRN0 sample list | EXP(613) IDA(88710) IPI(213005) IMP(25206) IGI(2047) IEP(933) ISS(28265) ISO(11) ISA(1439) ISM(3) RCA(470) TAS(95949) NAS(7152) IC(6837) ND(1706) IEA(73570) | ||
Default URL template: http://www.ensembl.org/Homo_sapiens/geneview?gene= | ||||||
Human - Homo sapiens GOA @EBI + XREFs gene_association.goa_human_hgnc README | 19817 | UniProt_Accession (or Ensembl_ID) UniProt_ID (or Ensembl_ID) International Protein Index with additional crossreferenced gene symbols | HGNC:4854 FZD6 O60353 HGNC:4044 4044 FZD6_HUMAN sample list | EXP(613) IDA(88710) IPI(213005) IMP(25206) IGI(2047) IEP(933) ISS(28265) ISO(11) ISA(1439) ISM(3) RCA(470) TAS(95949) NAS(7152) IC(6837) ND(1706) IEA(73570) | ||
Default URL template: http://www.genenames.org/data/hgnc_data.php?hgnc_id= | ||||||
Mouse - Mus musculus MGI gene_association.mgi README | 31925 | MGI_ID Gene Symbol Gene_Symbol (old) | P2ry12 MGI:1918089 P2Y12 sample list | EXP(701) IDA(72243) IPI(20894) IMP(61978) IGI(15812) IEP(2226) ISS(1830) ISO(147792) ISA(5083) ISM(32) RCA(306) TAS(7979) NAS(4350) IC(701) ND(45158) IEA(69374) | ||
Default URL template: http://www.informatics.jax.org/searches/accession_report.cgi?id= | ||||||
Yeast - Schizosaccharomyces pombe PomBase gene_association.pombase README | 5364 | Systematic Name Gene Name Gene Synonym | SPCC191.07 cyc1 sample list | EXP(1828) IDA(8565) IPI(3435) IMP(4746) IGI(695) IEP(19) ISS(931) ISO(2973) ISM(1200) TAS(360) NAS(510) IC(1638) ND(1766) IEA(3387) | ||
Default URL template: http://www.pombase.org/gene/ | ||||||
Pseudomonas - Pseudomonas aeruginosa PAO1 PseudoCAP gene_association.pseudocap | 1505 | PA# Gene Name Alt. Gene Name (opt.) | fliD PA1094 hook-associated protein sample list | EXP(40) IDA(866) IPI(42) IMP(1139) IGI(61) IEP(13) ISS(1229) ISO(13) ISA(10) IGC(48) TAS(11) NAS(18) | ||
Default URL template: http://www.pseudomonas.com/AnnotationByPAU.asp?PA= | ||||||
Rat - Rattus norvegicus RGD gene_association.rgd README | 23743 | RGD_ID (or Ensembl Id, or UniProt accession) Gene Symbol (or UniProt Entry Name) if GOA-provided, an International Protein Index identifier | Fgb D3Z8Y5_RAT D3Z8Y5 IPI00948614 sample list | EXP(424) IDA(27357) IPI(8115) IMP(10330) IGI(325) IEP(10846) ISS(27269) ISO(206603) RCA(5) TAS(3229) NAS(731) IC(180) ND(2040) IEA(92095) | ||
Default URL template: http://rgd.mcw.edu/tools/genes/genes_view.cgi?id= | ||||||
Yeast - Saccharomyces cerevisiae SGD gene_association.sgd README | 6895 | 7166 | SGD_ID Gene Name Systematic ORF Name | YJL166W S000003702 COR5 QCR8 sample list | EXP(11) IDA(17973) IPI(3064) IMP(13980) IGI(5319) IEP(23) ISS(957) ISO(15) ISA(251) ISM(435) RCA(580) TAS(242) NAS(82) IC(1004) ND(3542) IEA(46537) | |
Default URL template: http://www.yeastgenome.org/locus/ | ||||||
Common wallcress - Arabidopsis thaliana TAIR gene_association.tair README | 43753 | TAIR Accession Gene Name Gene Alias | AT4G31210 AT4G31210.1 LOCUS:2128101 F8F16.30 F8F16_30 sample list | IDA(22366) IPI(24892) IMP(17948) IGI(4193) IEP(4801) ISS(8174) ISM(37753) RCA(868) TAS(6686) NAS(710) IC(184) ND(26895) IEA(22959) | ||
Default URL template: http://www.arabidopsis.org/servlets/Search?type=general&search_action=detail&method=1&show_obsolete=F&sub_type=gene&SEARCH_EXACT=4&SEARCH_CONTAINS=1&name= | ||||||
Worm - Caenorhabditis elegans WormBase gene_association.wb README | 14619 | 22246 | Protein Name Gene Name Gene Symbol | casy-1 B0034.3 cdh-11 WBGENE00000403 sample list | EXP(2) IDA(7838) IPI(4259) IMP(10404) IGI(4653) IEP(169) ISS(1910) ISO(1) ISM(9) RCA(13) TAS(173) NAS(180) IC(115) ND(430) IEA(67437) | |
Default URL template: http://www.wormbase.org/db/gene/gene?name= | ||||||
Zebrafish - Danio rerio ZFIN gene_association.zfin README | 25443 | 25849 | ZFIN_ID Gene Symbol | ZDB-GENE-030131-6506 mobkl1b sample list | IDA(4623) IPI(1220) IMP(19983) IGI(5466) IEP(154) ISS(7001) ISO(13) ISM(1) TAS(111) NAS(127) IC(119) ND(7290) IEA(127138) | |
Default URL template: http://zfin.org/cgi-bin/webdriver?MIval=aa-markerview.apg&OID= |