GO Term Finder Ontology FilesVersion
gene_ontology.obo 10/08/2016
GO Term Mapper Ontology FilesVersion
gene_ontology.obo 10/08/2016
goslim_generic.obo
goslim_yeast.obo
goslim_pombe.obo
goslim_goa.obo1.854 10/19/2010
goslim_plant.obo


Organism, Gene Associations, and Authority Total Annotated
Gene Products
Total Estimated
Gene Products
Identifiers Example IDs Identifier Conversion Tool(s) Evidence Code Counts
Skin parasite - Leishmania major
L. major GeneDB
gene_association.GeneDB_Lmajor (10/07/2016)
README
782Systematic_ID
Systematic_ID
L302.10
L2256.04
LM5.39
sample list
EXP(67) IDA(198) IPI(11) IMP(107) IGI(19) IEP(2) ISS(177) ISO(1258) ISA(153) ISM(134) IGC(1) RCA(54) TAS(10) IC(8)
Malaria parasite - Plasmodium falciparum
P. falciparum GeneDB
gene_association.GeneDB_Pfalciparum (03/10/2015)
README
23735400Systematic Name
Systematic Name
PFL1830w
2277.t00366
PFL1830W
sample list
EXP(10) IDA(1888) IPI(122) IMP(32) IGI(17) IEP(3) ISS(2741) ISO(135) ISM(41) IGC(5) RCA(413) TAS(755) NAS(14) IC(56) ND(2)
Default URL template: http://www.genedb.org/genedb/Search?organism=malaria&name=
Trypanosome - Tryanosoma brucei
T. brucei GeneDB
gene_association.GeneDB_Tbrucei (10/07/2016)
README
3576Systematic Name
Gene Name
Gene Synonym
Tb927.7.4670
RRP4
TB927.7.4670
sample list
EXP(144) IDA(1012) IPI(121) IMP(509) IGI(28) IEP(3) ISS(512) ISO(278) ISA(988) ISM(3713) RCA(1100) TAS(589) NAS(2) IC(30)
Default URL template: http://www.genedb.org/genedb/Search?organism=tryp&name=
Candida - Candida albicans
CGD
gene_association.cgd (10/09/2016)
README
47829CGD_ID
Standard Name
Systematic name
CAL0004982
CaO19.6783
CA5922
Contig4-2621_0008
orf6.8848
sample list
IDA(2446) IPI(66) IMP(5687) IGI(926) IEP(44) ISS(1908) ISO(349) ISA(173) ISM(1328) TAS(46) NAS(176) IC(35) ND(14270) IEA(240910)
Default URL template: http://www.candidagenome.org/cgi-bin/locus.pl?locus=
Slime mold - Dictyostelium discoideum
DictyBase
gene_association.dictyBase (10/07/2016)
897912098DictyBase_ID
Gene Name
Alias
DdP2X
DDB_G0272004
p2xA
sample list
IDA(3239) IPI(689) IMP(2470) IGI(404) IEP(249) ISS(3564) RCA(2412) TAS(405) NAS(8) IC(168) ND(6539) IEA(37892)
Default URL template: http://dictybase.org/db/cgi-bin/dictyBase/locus.pl?locus=
Fruit fly - Drosophila melanogaster
FlyBase
gene_association.fb (10/07/2016)
README
1445016085FlyBase_ID
Gene Symbol
Gene Synonym
FBGN0031491
alpha4GT1
4-N-acetylgalactosaminyltransferase-1
CG17223
alpha1
sample list
IDA(16025) IPI(2889) IMP(23527) IGI(3200) IEP(1196) ISS(11410) ISO(1) ISA(139) ISM(2679) IGC(29) RCA(19) TAS(5186) NAS(2934) IC(1210) ND(9815) IEA(13235)
Default URL template: http://flybase.bio.indiana.edu/.bin/fbidq.html?
Bacterium coli - Escherichia coli
GOA @EBI
gene_association.goa_Ecoli
README
71877187UniProt_Accession (or Ensembl_ID)
UniProt_ID (or Ensembl_ID)
International Protein Index
A3QXC6
A3QXC6_ECOLX
sample list
IDA(10) IPI(140) IEA(45310)
Chicken - Gallus gallus
GOA @EBI
gene_association.goa_chicken (05/20/2016)
README
1553230837UniProt_Accession (or Ensembl_ID)
UniProt_ID (or Ensembl_ID)
International Protein Index
FGB
IPI00588322
FIBB_CHICK
Q02020
sample list
EXP(1) IDA(1884) IPI(468) IMP(820) IGI(9) IEP(137) ISS(4633) RCA(2) TAS(614) NAS(88) IC(22) ND(29) IEA(101081)
Cow - Bos taurus
GOA @EBI
gene_association.goa_cow (05/20/2016)
README
2163637225UniProt_Accession (or Ensembl_ID)
UniProt_ID (or Ensembl_ID)
International Protein Index
FGG
P12799
IPI00699860
FIBG_BOVIN
sample list
IDA(1403) IPI(430) IMP(237) IGI(1) IEP(6) ISS(14758) TAS(864) NAS(53) IC(15) ND(88) IEA(128148)
Human - Homo sapiens
GOA @EBI
gene_association.goa_human (05/20/2016)
README
47246UniProt_Accession (or Ensembl_ID)
UniProt_ID (or Ensembl_ID)
International Protein Index
TGFR1_HUMAN
IPI00005733
P36897
TGFBR1
sample list
EXP(1138) IDA(76347) IPI(77382) IMP(16542) IGI(1175) IEP(966) ISS(20047) TAS(95047) NAS(7546) IC(1401) ND(1889) IEA(157968)
Default URL template: http://www.ensembl.org/Homo_sapiens/geneview?gene=
Human - Homo sapiens
GOA @EBI + Ensembl
gene_association.goa_human_ensembl (05/20/2016)
README
47246UniProt_Accession (or Ensembl_ID)
UniProt_ID (or Ensembl_ID)
International Protein Index with additional crossreferenced gene symbols
FZD6
B4DRN0_HUMAN
ENSG00000164930
B4DRN0
sample list
EXP(1138) IDA(76347) IPI(77382) IMP(16542) IGI(1175) IEP(966) ISS(20047) TAS(95047) NAS(7546) IC(1401) ND(1889) IEA(157968)
Default URL template: http://www.ensembl.org/Homo_sapiens/geneview?gene=
Human - Homo sapiens
GOA @EBI + XREFs
gene_association.goa_human_hgnc (05/20/2016)
README
47246UniProt_Accession (or Ensembl_ID)
UniProt_ID (or Ensembl_ID)
International Protein Index with additional crossreferenced gene symbols
HGNC:4854
FZD6
O60353
HGNC:4044
4044
FZD6_HUMAN
sample list
EXP(1138) IDA(76347) IPI(77382) IMP(16542) IGI(1175) IEP(966) ISS(20047) TAS(95047) NAS(7546) IC(1401) ND(1889) IEA(157968)
Default URL template: http://www.genenames.org/data/hgnc_data.php?hgnc_id=
Rice - Oryza sativa
Gramene
gene_association.gramene_oryza (01/08/2016)
README
4114141521Swiss-Prot/TrEMBL_ID
Gene Name/Symbol
O04138
LOC_Os04g41620
PR-3 CLASS IV CHITINASE
Os04g0493400
CHT4
sample list
IDA(117) IPI(6) IMP(151) IGI(42) IEP(65) ISS(373) RCA(46563) TAS(13) IC(1962)
Default URL template: http://www.gramene.org/perl/protein_search?acc=
Bacillus anthracis
gene_association.jcvi_Banthracis (1.47 03/18/2011)
README
52805507JCVI Locus Name
Gene Symbol
dnaN-2
BA_2684
sample list
IDA(3) IMP(2) ISS(5955) TAS(15) NAS(4) ND(7054)
Coxiella burnetii
gene_association.jcvi_Cburnetii (1.39 03/18/2011)
README
20332095JCVI Locus Name
Gene Symbol
CBU1815
CBU0002
sample list
ISS(2148) TAS(2) ND(2984)
Campylobacter jejuni
gene_association.jcvi_Cjejuni (1.40 03/18/2011)
README
1829flaB
CJE_1526
sample list
IDA(1) IMP(15) IGI(15) ISS(2577) TAS(1) ND(1985)
Dehalococcoides ethenogenes
gene_association.jcvi_Dethenogenes (1.30 03/18/2011)
1584DET_0079
tceA
sample list
ISS(2139) TAS(4) ND(1780)
Geobacter - Geobacter sulfurreducens PCA
gene_association.jcvi_Gsulfurreducens (1.39 03/18/2011)
README
34103533JCVI Locus Name
Gene Symbol
GSU_0001
dnaN
sample list
IDA(4) ISS(4148) TAS(2) NAS(8) ND(3988)
Listeria monocytogenes
gene_association.jcvi_Lmonocytogenes (1.46 03/18/2011)
README
2822LMOF2365_1337
polC
LMOf2365_1337
sample list
IMP(2) ISS(4198) TAS(9) ND(2963)
Methylococcus capsulatus
gene_association.jcvi_Mcapsulatus (1.41 03/18/2011)
README
2925MCA_1120
sample list
IDA(2) ISS(3981) TAS(8) ND(3250)
Pseudomonas syringae
gene_association.jcvi_Psyringae (1.48 03/18/2011)
README
40125763JCVI Locus Name
Gene Symbol
flgI
PSPTO_1942
sample list
IDA(377) IPI(20) IMP(7) IGI(22) IEP(3) ISS(4348) IGC(31) TAS(41) IC(45) ND(5401)
Shewanella oneidensis
gene_association.jcvi_Soneidensis (1.45 03/18/2011)
README
48424843JCVI Locus Name
Gene Symbol
H
SO_2953
sample list
IMP(5) ISS(5253) TAS(48) ND(6813)
Silicibacter pomeroyi
gene_association.jcvi_Spomeroyi (1.41 03/18/2011)
README
4252SPO_3786
sample list
IDA(2) ISS(6618) TAS(117) NAS(2) IC(15) ND(3974)
Cholera spirillum - Vibrio cholerae
gene_association.jcvi_Vcholerae (1.48 03/18/2011)
README
38583885JCVI Locus Name
Gene Symbol
holB
VC_2015
sample list
IDA(6) IMP(11) IGI(28) ISS(4266) ND(5078)
Mouse - Mus musculus
MGI
gene_association.mgi (10/06/2016)
README
24182MGI_ID
Gene Symbol
Gene_Symbol (old)
P2ry12
MGI:1918089
P2Y12
sample list
EXP(50) IDA(46048) IPI(11001) IMP(37232) IGI(8309) IEP(547) ISS(1762) ISO(107331) ISA(5374) ISM(23) RCA(99) TAS(2900) NAS(649) IC(582) ND(21676) IEA(82522)
Default URL template: http://www.informatics.jax.org/searches/accession_report.cgi?id=
Yeast - Schizosaccharomyces pombe
PomBase
gene_association.pombase (11/25/2011)
README
5396Systematic Name
Gene Name
Gene Synonym
SPCC191.07
cyc1
sample list
EXP(122) IDA(13033) IPI(1663) IMP(5638) IGI(853) IEP(54) ISS(1861) ISO(6649) ISM(810) IGC(1) RCA(4) TAS(398) NAS(1114) IC(1845) ND(2577) IEA(4312)
Default URL template: http://www.pombase.org/search/ensembl/
Pseudomonas - Pseudomonas aeruginosa PAO1
PseudoCAP
gene_association.pseudocap (10/11/2016)
1487PA#
Gene Name
Alt. Gene Name (opt.)
fliD
PA1094
hook-associated protein
sample list
EXP(45) IDA(931) IPI(29) IMP(1200) IGI(63) IEP(13) ISS(1226) ISO(10) ISA(1) IGC(48) TAS(10) NAS(18) IC(2)
Default URL template: http://www.pseudomonas.com/AnnotationByPAU.asp?PA=
Rat - Rattus norvegicus
RGD
gene_association.rgd (10/08/2016)
README
38903RGD_ID (or Ensembl Id, or UniProt accession)
Gene Symbol (or UniProt Entry Name)
if GOA-provided, an International Protein Index identifier
Fgb
D3Z8Y5_RAT
D3Z8Y5
IPI00948614
sample list
EXP(12) IDA(31579) IPI(7483) IMP(9415) IGI(363) IEP(9830) ISS(38219) ISO(146832) ISA(3) RCA(2) TAS(4332) NAS(866) IC(292) ND(6508) IEA(268486)
Default URL template: http://rgd.mcw.edu/tools/genes/genes_view.cgi?id=
Yeast - Saccharomyces cerevisiae
SGD
gene_association.sgd (10/08/2016)
README
64197166SGD_ID
Gene Name
Systematic ORF Name
YJL166W
S000003702
COR5
QCR8
sample list
IDA(23427) IPI(2421) IMP(12858) IGI(3804) IEP(122) ISS(1835) ISO(8) ISA(190) ISM(1256) RCA(6) TAS(488) NAS(102) IC(1381) ND(3635) IEA(44493)
Default URL template: http://www.yeastgenome.org/cgi-bin/locus.pl?locus=
Common wallcress - Arabidopsis thaliana
TAIR
gene_association.tair (10/01/2016)
README
30448TAIR Accession
Gene Name
Gene Alias
AT4G31210
AT4G31210.1
LOCUS:2128101
F8F16.30
F8F16_30
sample list
IDA(34833) IPI(7485) IMP(13156) IGI(3088) IEP(4761) ISS(26028) ISM(28013) RCA(46) TAS(6822) NAS(754) IC(210) ND(23157) IEA(48551)
Default URL template: http://www.arabidopsis.org/servlets/Search?type=general&search_action=detail&method=1&show_obsolete=F&sub_type=gene&SEARCH_EXACT=4&SEARCH_CONTAINS=1&name=
Worm - Caenorhabditis elegans
WormBase
gene_association.wb (09/16/2016)
README
1501422246Protein Name
Gene Name
Gene Symbol
casy-1
B0034.3
cdh-11
WBGENE00000403
sample list
IDA(7088) IPI(3468) IMP(7379) IGI(3089) IEP(334) ISS(1817) ISO(1) ISM(9) TAS(195) NAS(209) IC(110) ND(382) IEA(100482)
Default URL template: http://www.wormbase.org/db/gene/gene?name=
Zebrafish - Danio rerio
ZFIN
gene_association.zfin (10/10/2016)
README
2176222409ZFIN_ID
Gene Symbol
ZDB-GENE-030131-6506
mobkl1b
sample list
IDA(3270) IPI(677) IMP(12838) IGI(3851) IEP(130) ISS(4668) NAS(130) IC(87) ND(7945) IEA(128248)
Default URL template: http://zfin.org/cgi-bin/webdriver?MIval=aa-markerview.apg&OID=